Evaluation of a Genetic Test for Diagnose of Primary Hypolactasia in Northeast of Iran (Khorasan) | ||
Iranian Journal of Basic Medical Sciences | ||
مقاله 2، دوره 15، شماره 6، بهمن 2012، صفحه 1127-1130 اصل مقاله (125.79 K) | ||
نوع مقاله: Original Article | ||
شناسه دیجیتال (DOI): 10.22038/ijbms.2012.4930 | ||
نویسندگان | ||
Maryam Alizadeh1؛ Ariane Sadr-Nabavi* 1، 2 | ||
1Departmant of Human Genetic, Mashhad University of Medical Sciences, Mashhad, Iran | ||
2Iranian Academic Centres for Education, Culture and Research (ACECR) | ||
چکیده | ||
Objective(s) Primary or adult type hypolactasia, the most common enzyme deficiency in the world, is due to reduced lactase activity in the intestinal cell after weaning. Lactase non-persistence is inherited as an autosomal recessive trait. A DNA variant, single nucleotide polymorphism C/T−13910 which is located on 13910 base pairs (bp) upstream of the lactase gene (LCT) at chromosome 2 has been show to associate with the lactase persistence/non-persistence. The prevalence of the C/T-13910 variant is different for hypolactasia in European, Asian, African-American and Northern African populations. In this study, we investigated, for the first time the allele frequent of the single nucleotide polymorphism C/T−13910 in the Iranian population in khorasan province with hypolactasia. Materials and Methods Peripheral blood was collected from 100 subjecs with primary hypolactasia and 100 healthy individuals as a control group. Genomic DNA was extracted. The genotype was analyzed with the PCR-RFLP method. A statistical analysis was performed by chi-square test using SPSS software. A P-value of <0.05 was considered statistically significant. Results In case group allelic frequency for SNP T-13910C (C, T) was respectively 95%, 5% vs. control group 86% and 14%. Genotype frequency (CC, CT, TT) in patient group was 90%, 10%, 0% vs. control group 74%, 24% and 2%. So according to our findings, there were significant differences between allelic frequencies (P=0.03), and in genotype frequency between case and control groups (P=0.006). Conclusion Based on our results, analysis of C\T-13910 polymorphism can be used as a simple genetic test for diagnosis of primary type hypolactasia in the Iranian population. | ||
کلیدواژهها | ||
Hypolactasia؛ Iranian Population؛ LPH | ||
مراجع | ||
1. Kaur K, Mahmood S, Mahmood A. Hypolactasia as a molecular basis of lactose intolerance. IJBB 2006; 43:267-274. 2. Lomer MCE, Parkes GC, Sanderson JD, Intolerance L. High frequency of MCM6 lactose intolerance genotype in Polynesian People. AP& T 2010. 32: 829–830. 3. Swagerty DL, Walling AD, Klein RM. Lactose intolerance. Am Fam Physician 2002; 65:1845-1860. 4. Mattar R, Monteiro MS, Silva JMK, Carrilho FJ. LCT-22018G> A single nucleotide polymorphism is a better predictor of adult-type hypolactasia/lactase persistence in Japanese-Brazilians than LCT-13910C> T. Clin 2010; 65:1399–1400. 5. Rasinpere H, Savilahti E, Enattah NS, Kuokkanen M, Tِtterman N, Lindahl H, et al A genetic test which can be used to diagnose adult-type hypolactasia in children. Gut 2004; 53:1571-1576. 6. Büning C, Genschel J, Jurga J, Fiedler T, Voderholzer W, Fiedler EM, et al Introducing genetic testing for adult-type hypolactasia. Digestion 2005; 71:245-250. 7. Weiskirchen R, Tag CG, Mengsteab S, Gressner AM, Ingram CJE, Swallow DM. Pitfalls in LightCycler diagnosis of the single-nucleotide polymorphism 13.9 kb upstream of the lactase gene that is associated with adult-type hypolactasia. Clin Chim Acta 2007; 384:93-98. 8. Anthoni SR, Rasinpera HA, Kotamies AJ, Komu HA, Pihlajamak HK, Kolho KL, et al Molecularly defined adult-type hypolactasia among working age people with reference to milk consumption and gastrointestinal symptoms. World J Gastrointest Endosc 2007; 13:1230-1235. 9. Kruse TA, Bolund L, Grzeschik KH, Ropers HH, Sjoestroem H, Noren O, et al The human lactase-phlorizin hydrolase gene is located on chromosome 2. FEBS lett 1988; 240:123-126. 10. Sahi T, Isokoski M, Jussila J, Launiala K, Pyorala K. Recessive inheritance of adult-type lactose malabsorption. Lancet 1973; 302:823-826. 11. Enattah NS, Sahi T, Savilahti E, Terwilliger JD, Peltonen L, Jaevelae. Identification of a variant associated with adult-type hypolactasia. Nat Genet 2002; 30:233-237. 12. Troelsen JT, Olsen J, Moeller J, Sjoestroem H. An upstream polymorphism associated with lactase persistence has increased enhancer activity. Gastroenterology 2003; 125:1686-1694. 13. Kuokkanen M, Enattah NS, Oksanen A, Savilahti E, Orpana A, Jaevelae. I. Transcriptional regulation of the lactase-phlorizin hydrolase gene by polymorphisms associated with adult-type hypolactasia. Gut 2003; 52:647-652. 14. Tishkoff SA, Reed FA, Ranciaro A, Voight BF, Babbitt CC, Silverman JS, et al Convergent adaptation of human lactase persistence in Africa and Europe. Nat Genet 2006; 39:31-40. 15. Sadre M, Karbasi K. Lactose intolerance in Iran. Am J Clin Nutr 1979; 32:1948-1954. 16. Rahgozar S, Salehi Mansour PEAA, Moafi AR, Jarvela I, Fatehifar MR. Study of c/t-13910 variant in association with primary hypolactasia (ph) in the rural population of central Iran. Hakim 2004; 7:55-60. | ||
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